H. Auguste DutcherPrepping Illumina reads for analysis (part 1 of 2)The very basics of organizing your reads and cleaning headersDec 7, 2017Dec 7, 2017
H. Auguste DutcherTurn BLAST results into a presence/absence matrix(Also an introduction to working with tabular data using pandas)Oct 31, 20171Oct 31, 20171
H. Auguste DutcherBatch download genomes from NCBIGet ALL available complete genomes for a given bacterium, starting with just a list of species names.Oct 26, 20171Oct 26, 20171
H. Auguste DutcherSetting up virtual environments in PythonIntegrate with Jupyter notebooks, use the iPython interpreter, and don’t bork your entire setup when you try something newOct 22, 2017Oct 22, 2017