In the provided example, isn’t the fact that the results change with respect to the software…
Marc Legault

In the provided example, the differences are custom chip description files. These are annotation files expected to change over time as we learn more about the genome. The fact that the results change with different annotation files is not a bug, just a reflection of the knowledge at the time the chip description file was created.

We don’t aim to ensure “correctness” but offer a platform for computational replication so that readers can achieve the same results and draw their own conclusions.

Like what you read? Give Brett Beaulieu-Jones a round of applause.

From a quick cheer to a standing ovation, clap to show how much you enjoyed this story.