Dikshita Ramse
2 min readJul 25, 2023

๐Ÿ”ต Difference between EXONUCLEASE and ENDONUCLEASE:

Exonucleases and endonucleases are both enzymes that play important roles in DNA and RNA processing, but they have distinct functions and mechanisms of action. Here's the difference between the two:

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Exonucleases are enzymes that degrade nucleic acids by cleaving the nucleotides from the ends of the polynucleotide chains. They work by removing nucleotides one at a time, either from the 5' end (5'-exonuclease) or the 3' end (3'-exonuclease) of the nucleic acid chain. These enzymes are involved in various cellular processes, such as DNA repair, DNA replication, and RNA processing.

โ—ฝ๏ธ5'-Exonuclease: This type of exonuclease cleaves nucleotides from the 5' end of the nucleic acid chain.

โ—ฝ๏ธ3'-Exonuclease: This type of exonuclease cleaves nucleotides from the 3' end of the nucleic acid chain.

Exonucleases are essential for maintaining the integrity of DNA and RNA molecules, as they can remove damaged or incorrect nucleotides during repair processes. They are also involved in removing RNA primers during DNA replication and processing RNA molecules in some post-transcriptional modifications.

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Endonucleases are enzymes that cleave the phosphodiester bonds within the nucleic acid chain, resulting in the formation of two or more fragments. Unlike exonucleases, endonucleases cut the nucleic acid chain at specific internal sites rather than from the ends. These enzymes are crucial for various cellular processes, including DNA repair, restriction-modification systems, and gene regulation.

Endonucleases can be classified based on their function and recognition sites:

โ—ฝ๏ธRestriction endonucleases: These enzymes are part of the bacterial defense system against invading foreign DNA, such as viral DNA. They recognize specific DNA sequences and cleave the DNA at those recognition sites.

โ—ฝ๏ธDNA repair endonucleases: These enzymes are involved in the repair of damaged DNA by cutting the DNA strand near the site of damage, allowing the damaged section to be excised and replaced.

Image source : Google Images

In summary, exonucleases remove nucleotides from the ends of DNA or RNA molecules, while endonucleases cleave the phosphodiester bonds at specific internal sites within the nucleic acid chain. Both types of enzymes play crucial roles in various cellular processes, including DNA repair, DNA replication, RNA processing, and gene regulation.

Dikshita Ramse

I'm pursuing bachelor's in biotechnology and want to learn and explore different fields of science and technology.