Jillian RoweinTowards Data ScienceUsing LLMs to Query PubMed Knowledge Bases for BioMedical ResearchAI for fun and profit!Jul 242Jul 242
Jillian RoweinTowards Data ScienceGet a Fully Configured Apache Airflow Docker Dev Stack with BitnamiBuild out your data science workflow infrastructure with a fully configured and customizable Apache Airflow docker-compose development…Aug 3, 2020Aug 3, 2020
Jillian RoweinLevel Up CodingDeploy Dash with Helm on Kubernetes with AWS EKSToday we are going to be talking about Deploying a Dash App on Kubernetes with a Helm Chart using the AWS Managed Kubernetes Service EKS.Jul 15, 2020Jul 15, 2020
Jillian RoweinLevel Up CodingRShiny Authentication with Polished on AWS KubernetesIf you’re looking for a hassle free way to add authentication to your RShiny Apps you should check out polished.tech. In their own words:Jul 7, 20201Jul 7, 20201
Jillian RoweinTowards Data ScienceManage High Content Screening CellProfiler Pipelines with Apache AirflowIf you are running a High Content Screening Pipeline you probably have a lot of moving pieces. As a non-exhaustive list you need to:May 31, 2020May 31, 2020
Jillian RoweinTowards Data ScienceGetting Started with CellProfiler in BatchRunning CellProfiler in batch mode is the ideal way to automate large scale analyses. Or not so large scale analyses that you prefer to…May 18, 2020May 18, 2020
Jillian RoweinLevel Up CodingDeploy and Scale your Dask Cluster with KubernetesLearn how to deploy your Dask Cluster on Kubernetes with a Helm chart, along with scaling your workers for world domination!May 18, 2020May 18, 2020
Jillian RoweinTowards Data ScienceSetup a High Content Screening Imaging Platform with Label StudioHaving a platform for annotating image data is essential for HCS. Here I will demonstrate annotating C Elegans images from the Broad.May 7, 2020May 7, 2020
Jillian RoweinThe StartupDeploy RShiny with Kubernetes using AWS EKS and TerraformDeploy RShiny on AWS EKS with TerraformApr 23, 20201Apr 23, 20201
Jillian RoweinTowards Data ScienceDeploy RShiny with the Rocker/Shiny Docker ImageIf you are deploying RShiny with docker you can roll your own image , or you can use the rocker Dockerhub image .Apr 13, 2020Apr 13, 2020