This works great, but what if I don’t want to have my project dir contain the path `wp-content/themes/codeship-theme/`?

What if I have my theme and multiple plugins in the work all for the same website? This makes it difficult to version on a local dev environment, because you can only have one git instance; you couldn’t have multiple in the site root for every plugin and theme.

Is there any workaround to this? Some way that I can “push” plugins and themes to the WP Engine site with git without having to mess up my working directories?