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Roelof van Wyk
Roelof van Wyk

99 Followers

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Jan 27, 2022

Quick transcriptomics: Expression quantification and basic concepts — Part 2

Part 1 This paper is part of a series following from Part 1. In Part 1 we collected data and mapped the transcriptome using Kallisto. The data we collected was for P. falciparum and we downloaded the ring stage parasite data. This data contains replicates and is part of a…

Transcriptomics

3 min read

Quick transcriptomics: Expression quantification and basic concepts — Part 2
Quick transcriptomics: Expression quantification and basic concepts — Part 2
Transcriptomics

3 min read


Jan 27, 2022

Quick transcriptomics: Expression quantification and basic concepts — Part 1

Part 2 This paper is intended for research students that are just getting started with transcriptomics/bioinformatics/computational biology or a bench scientist keen to learn some computational basics of transcriptome analysis from bulk RNA-Seq data. It’s very important to note that this paper only addresses bulk RNA-Seq and not scRNA-Seq. This…

Transcriptomics

8 min read

Quick transcriptomics: Expression quantification and basic concepts — Part 1
Quick transcriptomics: Expression quantification and basic concepts — Part 1
Transcriptomics

8 min read


Nov 17, 2021

Web scraping JavaScript sites and packaging them in FastAPI

Brief overview A common goal with web scraping, is publishing the scraped data as a API solution. Sites such as RapidAPI offer great opportunities to monetise your API solution and remove a lot of the hassles with self-publishing. Most Python users may already be familiar with the BeautifulSoup4 (BS4) library which allows…

Web Scraping

6 min read

Web scraping JavaScript sites and packaging them in FastAPI
Web scraping JavaScript sites and packaging them in FastAPI
Web Scraping

6 min read

Roelof van Wyk

Roelof van Wyk

99 Followers

Data Scientist/Biochemist

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