Yen-Chung CheninbiosyntaxWhy are there rectangles in my plots with Seurat v3.2.x? | Pipette and KeyboardIf you updated Seurat recently, you might find your FeaturePlot() and DimPlot() giving plots that look pixelated instead of the circular…Jan 14, 2021Jan 14, 2021
Yen-Chung Cheninbiosyntax101 excuses to indulge yourself with more coffeeI consider myself to be moderately addicted to coffee: I slurp a mug of coffee to start my day, and when in certain days, I take another…Jul 26, 2020Jul 26, 2020
Yen-Chung CheninbiosyntaxDependency issue: In Conda, with SCENICI’ve been working with pySCENIC in the recent couples of months. It’s a tool that is meant to uncover gene sets that are controlled by…Aug 4, 2019Aug 4, 2019
Yen-Chung Cheninbiosyntaxpsutil, python, and iccI used to dislike dependency management because there are so many things that require root or are mysteriously incompatible with each…Apr 5, 2019Apr 5, 2019
Yen-Chung CheninbiosyntaxBe a deTeXtiveSelf-handicapping can be quite productive on those non-urgent things. Recently, I noticed a LaTeX template, Awesome CV, so I was thinking…Apr 2, 2019Apr 2, 2019
Yen-Chung CheninbiosyntaxStrangled by factorsI am exaggerating, but sometimes stringsAsFactors is almost this deadly. I work with genomic data, and a common quest in my job is to…Mar 28, 2019Mar 28, 2019
Yen-Chung CheninbiosyntaxDealing with dependency without sudo like a dummy (again)The more I work with Linux, the more I encounter dependency issues. This is of course not too big a surprise, but it can be painful…Mar 3, 2019Mar 3, 2019
Yen-Chung CheninbiosyntaxReverse and find complement sequence in RRecently, I am continuously being amazed by how a seemingly simple task is actually implemented in a sophisticated way. I guess I am just…Dec 20, 2018Dec 20, 2018
