How to Write Good Quality Machine Learning Code

Ujwal Tewari
Analytics Vidhya
Published in
10 min readJan 5, 2023

Machine learning has become an increasingly popular and powerful tool for solving a wide range of problems in areas such as image recognition, natural language processing, and predictive modeling. While the algorithms and techniques used in machine learning are important, the quality of the code that implements these algorithms is also critical for creating effective and reliable models. In this blog, we will discuss some best practices for writing good quality machine learning code. We will provide examples and code templates to help you write code that is easy to understand, maintain, and debug, and we will also look at some real-life applications where good quality code has helped to achieve success. By following these tips, you can save time and effort in the long run and create better machine learning models.

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Index

  1. Introduction
  2. Best practices for writing good quality machine learning code
  3. Code templates for common machine learning tasks
  4. Importance of good quality code templates
  5. Conclusion

Introduction

Writing good quality machine learning code is essential for creating effective and reliable models. In this blog, we will discuss some best practices for writing code that is easy to understand, maintain, and debug. We will provide examples and code templates to help you write high quality machine learning code, and we will also look at some real-life applications where good quality code has helped to achieve success. By following these tips, you can save time and effort in the long run and create better machine learning models.

Why is Good quality code important?

Writing good quality machine learning code is crucial for creating effective and reliable models. Here are some tips to help you write code that is easy to understand, maintain, and debug:

  1. Use clear and descriptive variable names: Choosing descriptive variable names makes your code easier to read and understand. Avoid using single letter variable names or abbreviations, unless they are well-known in the field (e.g., using “X” for the input data).
  2. Use consistent formatting and indentation: Proper indentation and formatting makes your code more readable and easier to navigate. Choose a style guide (such as PEP8 for Python) and stick to it consistently.
  3. Add comments and documentation: Comments and documentation help explain the purpose and functionality of your code. Add inline comments to clarify complex or non-obvious code, and include docstrings to document the functions and modules in your code.
  4. Write modular and reusable code: Divide your code into logical modules or functions that can be easily reused in other projects. This makes it easier to maintain and debug your code, and reduces the risk of introducing errors.
  5. Test your code: Thoroughly testing your code helps ensure that it is working correctly and produces reliable results. Write unit tests for your code and use automated testing tools to catch any bugs early on.

By following these best practices, you can write high quality machine learning code that is easy to understand, maintain, and debug. This will save you time and effort in the long run, and help you create better machine learning models.

Lets get into code and reasons behind good code quality

Good Quality code examples with comments

Here are some examples to illustrate the tips for writing good quality machine learning code:

Use clear and descriptive variable names:

# Good:
data = pd.read_csv('input.csv')

# Bad:
x = pd.read_csv('input.csv')

Use consistent formatting and indentation:

# Good:
def predict(model, X):
y_pred = model.predict(X)
return y_pred

# Bad:
def predict(model, X):
y_pred = model.predict(X)
return y_pred

Add comments and documentation:

def predict(model, X):
"""
Makes predictions using the given model on the input data X.

Parameters:
model (sklearn.model_selection.Model): trained model
X (ndarray): input data

Returns:
ndarray: predictions
"""
y_pred = model.predict(X)
return y_pred

Write modular and reusable code:

# Good:
def preprocess_data(data):
# perform data preprocessing steps
return processed_data

def train_model(X, y):
model = RandomForestClassifier()
model.fit(X, y)
return model

def evaluate_model(model, X, y):
y_pred = model.predict(X)
accuracy = accuracy_score(y, y_pred)
return accuracy

# Bad:
def run_pipeline(data):
# perform data preprocessing,
# model training, and evaluation all in one function

Test your code:

def test_predict():
model = RandomForestClassifier()
X = np.array([[0, 1], [1, 0]])
y = np.array([0, 1])
model.fit(X, y)
X_test = np.array([[0, 0], [1, 1]])
y_test = np.array([0, 1])
y_pred = predict(model, X_test)
assert np.array_equal(y_pred, y_test)

Importance of Good Quality templates

Good quality code templates are important for the following reasons:

Reusability: Good quality code templates can be easily reused in different projects, saving time and effort in the long run.

For example, a code template for loading and exploring data can be reused in multiple projects, eliminating the need to write the same code over and over again.

def load_data(path):
"""
Loads and returns the data from the given file path.

Parameters:
path (str): file path

Returns:
pd.DataFrame: data
"""
data = pd.read_csv(path)
return data

# Reuse the load_data function in multiple projects
project_1_data = load_data('project_1_data.csv')
project_2_data = load_data('project_2_data.csv')

Maintainability: Good quality code templates are easy to understand and maintain, which makes it easier to update and debug them if needed.

For example, a code template with clear and descriptive variable names and well-organized structure is easier to understand and maintain than a template with confusing or poorly organized code.

def calculate_mean(data):
"""
Calculates and returns the mean of the given data.

Parameters:
data (list): list of numbers

Returns:
float: mean
"""
sum = 0
for item in data:
sum += item
mean = sum / len(data)
return mean

# Easy to understand and maintain due to clear and descriptive variable names

Readability: Good quality code templates are well-organized and easy to read, which makes it easier for others to understand and use them.

For example, a code template with consistent formatting and indentation is easier to read than a template with inconsistent formatting and indentation.

def calculate_mean(data):
sum = 0
for item in data:
sum += item
mean = sum / len(data)
return mean

# Poorly formatted and indented code is harder to read

def calculate_mean(data):
"""
Calculates and returns the mean of the given data.

Parameters:
data (list): list of numbers

Returns:
float: mean
"""
sum = 0
for item in data:
sum += item
mean = sum / len(data)
return mean

# Well-formatted and indented code is easier to read

Scalability: Good quality code templates are designed to be scalable, which means they can handle large volumes of data and be easily adapted to new situations.

For example, a code template for training a machine learning model on a large dataset can be easily adapted to a new dataset with a different size or structure.

def train_model(X, y):
"""
Trains and returns a linear regression model on the given data.

Parameters:
X (ndarray): input features
y (ndarray): target labels

Returns:
sklearn.linear_model.LinearRegression: trained model
"""
model = LinearRegression()
model.fit(X, y)
return model

# Can be easily adapted to different datasets and model types

Performance: Good quality code templates are optimized for performance, which means they run efficiently and can handle large volumes of data without slowing down.

def calculate_mean(data):
"""
Calculates and returns the mean of the given data.

Parameters:
data (list): list of numbers

Returns:
float: mean
"""
sum = 0
for item in data:
sum += item
mean = sum / len(data)
return mean

# Less efficient due to the use of a loop

def calculate_mean(data):
"""
Calculates and returns the mean of the given data.

Parameters:
data (list): list of numbers

Returns:
float: mean
"""
return sum(data) / len(data)

# More efficient due to the use of the built-in sum function

Overall, good quality code templates are an important part of the machine learning development process, as they can help you create reliable and effective models more efficiently.

Examples of Good Quality Code templates

Some examples of good quality code templates can be found below:

Training and evaluating a model:

def train_and_evaluate(X, y):
"""
Trains and evaluates a machine learning model on the given data.

Parameters:
X (ndarray): input features
y (ndarray): target labels

Returns:
tuple: trained model, evaluation metrics
"""
# Split data into train and test sets
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2)

# Train model on training set
model = RandomForestClassifier()
model.fit(X_train, y_train)

# Evaluate model on test set
y_pred = model.predict(X_test)
accuracy = accuracy_score(y_test, y_pred)
f1 = f1_score(y_test, y_pred)
return model, {'accuracy': accuracy, 'f1_score': f1}

Preprocessing data:

def preprocess_data(data):
"""
Preprocesses the data by performing the following steps:
- Drop missing values
- Encode categorical variables as integers
- Standardize numerical variables

Parameters:
data (pandas.DataFrame): input data

Returns:
tuple: preprocessed data, categorical columns, numerical columns
"""
# Drop missing values
data = data.dropna()

# Encode categorical variables
categorical_columns = data.select_dtypes(include='object').columns
data[categorical_columns] = data[categorical_columns].apply(lambda x: x.astype('category').cat.codes)

# Standardize numerical variables
numerical_columns = data.select_dtypes(include=['int64', 'float64']).columns
scaler = StandardScaler()
data[numerical_columns] = scaler.fit_transform(data[numerical_columns])

return data, categorical_columns, numerical_columns

Visualizing the results of a model:

def visualize_results(model, X, y, title):
"""
Visualizes the predictions of the model on the input data.

Parameters:
model (sklearn.model_selection.Model): trained model
X (ndarray): input features
y (ndarray): target labels
title (str): title for the plot
"""
# Make predictions on the input data
y_pred = model.predict(X)

# Plot the results
plt.scatter(X, y, c='blue')
plt.scatter(X, y_pred, c='red')
plt.title(title)
plt.show()

Loading and exploring data:

def load_and_explore_data(path):
"""
Loads and explores the data at the given path.

Parameters:
path (str): file path to the data

Returns:
pandas.DataFrame: loaded data
"""
# Load data
data = pd.read_csv(path)

# Print basic information about the data
print(f'Shape of the data: {data.shape}')
print(f'Columns: {data.columns}')
print(f'Data types: {data.dtypes}')
print(f'Missing values: {data.isnull().sum().sum()}')
print(f'Descriptive statistics: {data.describe()}')

return data

Tuning hyperparameters:

def tune_hyperparameters(model, param_grid, X, y):
"""
Tuning the hyperparameters of the model using cross-validation.

Parameters:
model (sklearn.model_selection.Model): model to tune
param_grid (dict): grid of hyperparameters to search over
X (ndarray): input features
y (ndarray): target labels

Returns:
tuple: best model, best hyperparameters
"""
# Create a cross-validation object
cv = KFold(n_splits=5, shuffle=True, random_state=42)

# Create a grid search object
grid_search = GridSearchCV(model, param_grid, cv=cv, scoring='f1')

# Fit the grid search object to the data
grid_search.fit(X, y)

# Get the best model and hyperparameters
best_model = grid_search.best_estimator_
best_params = grid_search.best_params_

return best_model, best_params

Persisting a model:

def persist_model(model, filename):
"""
Persists the model to a file.

Parameters:
model (sklearn.model_selection.Model): trained model
filename (str): file name to save the model to
"""
# Save the model to a file
joblib.dump(model, filename)

def load_model(filename):
"""
Loads the model from a file.

Parameters:
filename (str): file name to load the model from

Returns:
sklearn.model_selection.Model: trained model
"""
# Load the model from a file
model = joblib.load(filename)
return model

Splitting data into train and test sets:

def split_data(X, y, test_size=0.2, random_state=42):
"""
Splits the data into train and test sets.

Parameters:
X (ndarray): input features
y (ndarray): target labels
test_size (float): proportion of the data to use for testing (default: 0.2)
random_state (int): seed for the random number generator (default: 42)

Returns:
tuple: training data, test data
"""
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=test_size, random_state=random_state)
return X_train, X_test, y_train, y_test

Evaluating a model’s performance:

def evaluate_model(model, X, y, metrics=['accuracy', 'f1_score']):
"""
Evaluates the model on the given data using a set of metrics.

Parameters:
model (sklearn.model_selection.Model): trained model
X (ndarray): input features
y (ndarray): target labels
metrics (list): list of metrics to use for evaluation (default: ['accuracy', 'f1_score'])

Returns:
dict: evaluation metrics
"""
evaluation = {}
y_pred = model.predict(X)

if 'accuracy' in metrics:
evaluation['accuracy'] = accuracy_score(y, y_pred)
if 'f1_score' in metrics:
evaluation['f1_score'] = f1_score(y, y_pred)

return evaluation

Plotting a confusion matrix:

def plot_confusion_matrix(model, X, y, classes):
"""
Plots the confusion matrix for the model on the given data.

Parameters:
model (sklearn.model_selection.Model): trained model
X (ndarray): input features
y (ndarray): target labels
classes (list): list of class names
"""
# Make predictions on the input data
y_pred = model.predict(X)

# Compute the confusion matrix
cm = confusion_matrix(y, y_pred)

# Plot the confusion matrix
plt.imshow(cm, interpolation='nearest', cmap='Blues')
plt.title('Confusion matrix')
plt.colorbar()
tick_marks = np.arange(len(classes))
plt.xticks(tick_marks, classes, rotation=45)
plt.yticks(tick_marks, classes)
plt.grid(False)

thresh = cm.max() / 2.
for i, j in itertools.product(range(cm.shape[0]), range(cm.shape[1])):
plt.text(j, i, cm[i, j], horizontal

Real Life examples

Lets see some interesting real life cases on this topic

Here are some examples of real-life applications where good quality machine learning code has helped:

  1. Google’s self-driving car: The self-driving car developed by Google’s Waymo division relies on machine learning algorithms to navigate roads and avoid obstacles. The company has invested heavily in ensuring that the machine learning code used in the car is of high quality, with a team of engineers dedicated to debugging and testing the code.
    (Source: https://www.wired.com/story/waymo-self-driving-car-software/)
  2. Amazon’s product recommendation system: Amazon’s product recommendation system uses machine learning to suggest items to customers based on their purchase history and browsing behavior. The company has a team of data scientists and engineers who develop and maintain the machine learning code for this system, with a focus on writing modular and reusable code that can be easily scaled and updated.
    (Source:https://www.forbes.com/sites/forbestechcouncil/2018/08/08/the-importance-of-clean-code-in-data-science/?sh=7b7f72fa58cb)
  3. Netflix’s movie recommendation system: Netflix’s movie recommendation system uses machine learning to suggest movies and TV shows to users based on their viewing history and ratings. The company has a team of data scientists and engineers who develop and maintain the machine learning code for this system, with a focus on writing efficient and reliable code that can handle large volumes of data.
    (Source: https://www.techrepublic.com/article/how-netflix-uses-machine-learning-to-recommend-movies/)

Conclusion

In conclusion, writing good quality machine learning code is essential for creating effective and reliable models. By following best practices such as:

  • Using clear and descriptive variable names
  • Using consistent formatting and indentation
  • Adding comments and documentation
  • Writing modular and reusable code
  • Testing your code

You can improve the quality of your machine learning code. These practices can save you time and effort in the long run and help you create better models.

Real-life examples such as Google’s self-driving car, Amazon’s product recommendation system, and Netflix’s movie recommendation system demonstrate the importance of good quality code in machine learning. By investing in good quality code, these companies have been able to create successful applications that rely on machine learning algorithms.

In summary, good quality code templates are an important part of the machine learning development process, as they can help you create reliable and effective models more efficiently. They are reusable, maintainable, readable, scalable, and optimized for performance, making them an invaluable resource for any machine learning project.

Well done for completing the blog. Best wishes ahead.

By following the best practices outlined in this blog, you can set yourself up for success in your machine learning projects.

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Ujwal Tewari
Analytics Vidhya

Senior Research Scientist @Games24x7 | Intel AI innovator | Udacity DRL mentor | ML & AI blogger