Making data FAIR
An open-source software allows researchers to ‘Find, Access, Interoperate and Re-use’ neurophysiology data from different experiments more efficiently than ever before.
The brain is an immensely complex organ which regulates many of the behaviors that animals need to survive. To understand how the brain works, scientists monitor and record brain activity under different conditions using a variety of experimental techniques. These neurophysiological studies are often conducted on multiple types of cells in the brain as well as a variety of species, ranging from mice to flies, or even frogs and worms.
Such a range of approaches provides us with highly informative, complementary ‘views’ of the brain. However, to form a complete, coherent picture of how the brain works, scientists need to be able to integrate all the data from these different experiments. For this to happen effectively, neurophysiology data need to meet certain criteria: namely, they must be findable, accessible, interoperable, and re-usable (or FAIR for short). However, the sheer diversity of neurophysiology experiments impedes the ‘FAIR’-ness of the information obtained from them.
To overcome this problem, researchers need a standardized way to communicate their experiments and share their results — in other words, a ‘standard language’ to describe neurophysiology data. Rübel, Tritt, Ly, Dichter, Ghosh et al. therefore set out to create such a language that was not only FAIR, but could also co-evolve with neurophysiology research.
First, they produced a computer software program (called Neurodata Without Borders, or NWB for short) which generated and defined the different components of the new standard language. Then, other tools for data management were created to expand the NWB platform using the standardized language. This included data analysis and visualization methods, as well as an ‘archive’ to store and access data. Testing the new language and associated tools showed that they indeed allowed researchers to access, analyze, and share information from many different types of experiments, in organisms ranging from flies to humans.
The NWB software is open-source, meaning that anyone can obtain a copy and make changes to it. Thus, NWB and its associated resources provide the basis for a collaborative, community-based system for sharing neurophysiology data. Rübel et al. hope that NWB will inspire similar developments across other fields of biology that share similar levels of complexity with neurophysiology.
Originally published at https://elifesciences.org/digests/78362.
