(1,300) Bats in the Belfry

In the wake of Bat Appreciation Day, a look at an ambitious project to understand and conserve these often myth-understood creatures.

PacBio
PacBio
4 min readApr 20, 2018

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Pop quiz: Which animal accounts for around 20% of all living mammals, harbors (yet survives) some of the world’s deadliest diseases, lives proportionately longer than humans given its body size, and helps make tequila possible?

Bats.

From the tiniest bumblebee bat (Craseonycteris thonglongyai) to the large (1kg) golden-capped fruitbat (Acerodon jubatus), the diversity and rare adaptations in bats have both fascinated and terrified people for centuries. Now, an international consortium of bat biologists, computational scientists, conservation organizations and genome technologists has set out to decode the genomes of all 1,300 species of bats using PacBio long-read sequencing and other technologies.

The aim of the Bat1K initiative, as set forth by Emma Teeling of the University of Dublin, Sonja Vernes of the Max Planck Institute, and 146 others in this paper in the Annual Review of Animal Biosciences, is to “catalog the unique genetic diversity present in all living bats to better understand the molecular basis of their unique adaptations; uncover their evolutionary history; link genotype with phenotype; and ultimately better understand, promote, and conserve bats.”

The team is also hoping to resolve “some of the most passionate debates in science” centered around the evolutionary history of bats, which has been difficult to piece together due to an impoverished fossil record.

Artibeus sp. in Tortuguero National Park, Costa Rica

The information they uncover could benefit not only the research community, but the world at large. The authors argue that studying bats will enable us to address some of the most important challenges facing humanity into the next century including improving the well-being of a large and rapidly aging human population; preventing the spread of emergent infectious diseases; maintaining agricultural productivity; and restoring natural ecosystems worldwide.

Bats are suspected reservoirs for some of the deadliest viral diseases, including Ebola, SARS (severe acute respiratory syndrome), rabies, and MERS (Middle East respiratory syndrome coronavirus). But they appear to be asymptomatic and survive these infections. Figuring out why could increase our understanding of immune function and help prevent viral spillovers into humans.

Bats also exhibit extraordinary longevity — they can live up to 10 times longer than expected given their small body size and high metabolic rate. Only 19 mammal species live proportionately longer than humans given their body size, and 18 are bats.

“Bats show few signs of senescence and low to negligible rates of cancer, suggesting they have also evolved unique mechanisms to extend their health spans, rendering them excellent models to study extended mammalian longevity and ageing,” the team writes.

By identifying bats’ cellular repair mechanisms, researchers could also gain insight into inflammatory disorders associated with autoimmune diseases, which are among the fastest growing causes of disease worldwide.

“The ability to modulate inappropriate inflammation in response to stressors without impairing immune function could improve the lives of millions,” the authors write.

Studying the genetics of echolocation, vocal learning and sensory perception in bats could shed light into human blindness, deafness and speech disorders, they add. And characterizing bat wing development could improve our understanding of how changes in limb developmental building blocks can lead to human limb malformations.

In regard to the ecosystem, bats perform key services. They pollinate crop species in the tropics (including agave, making possible the distillation of tequila) and disperse seeds across long distances, maintaining plant genetic diversity and aiding the regeneration of forests after clearing. They are able to breach ocean barriers, making them indispensable to isolated island ecosystems. They also feed on crop pests throughout their range; without bats, it is estimated that the United States would spend more than $3 billion a year on pesticides alone, the authors report.

“Bat1K will develop a genomic ark that can be used to benchmark the genomic health of different bat species to uncover populations in need of immediate conservation efforts,” the authors write. “Prioritization of bat genomes is not just desirable but indispensable to confront the many challenges to human well-being, ecosystem function, and biodiversity conservation we now face.”

Find out more about the project here: http://bat1k.ucd.ie

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PacBio
PacBio

PacBio is is the leading provider of high-quality sequencing of genomes, transcriptomes & epigenomes.