Hyperspectral imaging in agriculture: opportunities, benefits and future perspectives

Ivanov Igor
Gamaya blog
Published in
6 min readAug 9, 2020

A Short History of Spectral Imaging in Agriculture

Remote sensing using drones, satellites and sensors in fields has revolutionized agriculture around the world, making it possible to understand what is happening to crops day-by-day and year-on-year.

NDVI (normalized difference vegetation index) has been around since the 1970s and is the most commonly used remote sensing indicator. Drones and satellites capture how much more near-infrared light is reflected compared to visible red — and NDVI assigns a value between -1 and 1. The higher values (0–1) indicate live green material, with higher numbers meaning greater plant density and health. Lower values correspond to non-plant surfaces, such as soil or water. Industry tools like drone mapping software convert these values into easy-to-understand visual images, which make it simple for farm operators to differentiate bare soil from grasses or forests, to estimate biomass, to detect plants under stress, and to distinguish between crops and crop stages.

High-resolution spectroscopy, including multi and hyperspectral imaging, is the latest evolution in remote sensing, enhancing our capabilities to see, and therefore address issues in fields that are not visible to the human eye. The unique benefit of hyperspectral imaging is the capability to characterize a wide range of chemical and biological traits of plants and soils by way of analyzing their reflective properties across a range of narrow spectral bands.

Hyperspectral imaging can be applied to various industries, from mineralogy, medical imaging to food quality analysis and agriculture. Agriculture, with its biological complexity and enormous variability of growing conditions, weather, soil and crop types, crop varieties, etc. is a perfect target for hyperspectral imaging technology.

Sugarcane varieties, hyperspectral image

What’s hyperspectral imaging?

Hyperspectral imaging is one of the most information-rich sources of remote sensing data that exists. It can capture the entire, continuous electromagnetic spectrum of color and light, and not just the bands of red, green and blue light that are usually visible to the human eye. Initially developed for military and space use, hyperspectral imaging is now being applied to tackle a myriad of commercial opportunities, including in agriculture. But, it comes at a cost. These images are collected continuously over a large number of narrow bands, making the data more voluminous and complicated than other types of multispectral data. Huge data volumes combined with expensive hardware and operational and data processing complexity typically pose significant challenges for hyperspectral data handling and analysis.

NASA developed hyperspectral imaging technology for military applications and the technology is mostly utilized by military and research organizations. Today, hyperspectral imaging is not largely adopted in commercial domains, including agriculture.

Hyperspectral data collected over a large number of narrow bands in continuous spectral coverage are voluminous and more complex than multispectral data posing significant challenges in data handling and analysis.

Benefits of hyperspectral imaging over traditional imagery

  • The unique benefit of hyperspectral imaging is the capability to characterize a wide range of chemical and biological traits of plants and soil by way of analyzing their reflective properties across a range of narrow spectral bands. Hyperspectral imaging extends the human vision and can capture issues that are not visible to agronomists.
  • The high spectral resolution provides much more informational content to describe the analyzed object. As agriculture is a biologically complex and the most diverse environment, and spectroscopy is a powerful tool to characterize biological complexity and various crop parameters. Hyperspectral imaging technology allows catching all kinds of variability (varieties, weather, soil types). A high spectral resolution of hyperspectral imaging extends several potential issues that can be addressed using spectral imaging.
  • Theoretically, one can develop a multispectral camera, when the spectral bands required to address a specific issue are known. Still, it can not be used for drastically different geographies, climate conditions, soil conditions. It is impossible to know in advance whether a particular multispectral camera with its small selection of bands would capture the relevant information about a specific phenomenon of interest.

The unique position of Gamaya in hyperspectral imaging

Gamaya takes a unique approach to solve these issues and make hyperspectral imaging a cost-effective and accessible solution for farming operations around the world.

Our proprietary lightweight hyperspectral camera can be attached easily to drones, aircraft and other remote sensing devices to measure the visible, near- and infrared light portions of the electromagnetic spectrum — providing more profound insights about plants and fields than has ever been possible. Gamaya has developed proprietary and patented the world’s smallest and lightest fully integrated HSI camera for drone-based deployment. The camera is designed specifically for agriculture. 20x in-sensor data compression enables economically viable applications in agriculture.

Patented HSI sensor calibration system. Researchers have been using HSI for years to characterize specific crop issues and crop physiology based on the ground measurements of crop properties. Most of them managed to establish a correlation, developed models to diagnose a particular crop issue using HSI, and published numerous publications and research papers. However, most of these models fail when they are applied in a large-scale and commercial environment, affected by several factors, such as soil types, weather conditions, crop variety, growing practices, etc. Calibration of HSI cameras has not been taken into account not just by researchers, but also by some satellite companies and well-established organizations.

HSI data processing — a very challenging piece, addressed by Gamaya by tightly integrating our hardware with data processing software. The camera is specifically designed to efficiently provide a maximum amount of information when paired with our analytical software. The HSI data processing includes multiple steps, including the atmospheric correction, to account for the interaction of solar radiation with the atmosphere.

Interpretation of imaging data. Also, we have developed machine learning and computer vision algorithms that power our crop models and help them deal effectively with the complexity of data ingested. This way, we can provide robust analysis and crop management advice for all kinds of challenges presented by the diverse conditions of crops.

Our ability to cross-calibrate a wide range of imaging sensors, including the available RGB and multispectral drone and space-borne imaging data sources. Importantly, any imaging data source is only as good as its calibration. In most scenarios, a small number of well-calibrated bands is superior to a large number of uncalibrated ones. This is a crucial trade-off that few companies in the world understand.

Corn varieties, hyperspectral image

Potential applications of hyperspectral imaging in agriculture

  1. Crop nutrition and fertilization, including macro and micronutrients (P, K, Mg, Mn, Cu, Mn, Zn)
  2. Early disease detection and stresses (e.g., citrus greening)
  3. Biophysical indicators for high throughput phenotyping to support plant breeding experiments. Analysis of biophysical properties (e.g., LAI, biomass, yield, density)
  4. Spectral discrimination of plant species, vegetation types and their genotypes
  5. Analysis of biochemical properties (e.g, Anthocyanins, Carotenoids, Chlorophyll)
Evaluation of different fertilization regimes, hyperspectral image

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Ivanov Igor
Gamaya blog

multipotentialite aiming to make agriculture great again!