Jingyi Jessica LiBridging Cells and Space: The Journey of scDesign3 ExplorationAn interview of Jingyi Jessica Li by statsupai.comApr 6Apr 6
Jingyi Jessica LiinTowards Data ScienceStatistical Method scDEED Detects Dubious t-SNE and UMAP Embeddings and Optimizes HyperparametersscDEED assigns a reliability score to each 2D embedding to indicate how much the data point’s mid-range neighbors change in the 2D spaceMar 5Mar 5
Jingyi Jessica LiPCA outperforms popular hidden variable inference methods for molecular QTL mappingIt is also orders of magnitude faster and much easier to interpret and useNov 5, 20221Nov 5, 20221
Jingyi Jessica LiinTowards Data ScienceDESeq2 and edgeR should no longer be the default choices for large-sample differential gene…Complexities should not be added unless necessary.Mar 25, 20225Mar 25, 20225
Jingyi Jessica LiinTowards Data ScienceA large-sample crisis or not?Sanity check by permutation should be done for large samplesMar 16, 2022Mar 16, 2022