Jingyi Jessica LiBridging Cells and Space: The Journey of scDesign3 ExplorationAn interview of Jingyi Jessica Li by statsupai.com6 min read·Apr 6, 2024----
Jingyi Jessica LiinTowards Data ScienceStatistical Method scDEED Detects Dubious t-SNE and UMAP Embeddings and Optimizes HyperparametersscDEED assigns a reliability score to each 2D embedding to indicate how much the data point’s mid-range neighbors change in the 2D space6 min read·Mar 5, 2024----
Jingyi Jessica LiPCA outperforms popular hidden variable inference methods for molecular QTL mappingIt is also orders of magnitude faster and much easier to interpret and use4 min read·Nov 5, 2022--1--1
Jingyi Jessica LiinTowards Data ScienceDESeq2 and edgeR should no longer be the default choices for large-sample differential gene…Complexities should not be added unless necessary.10 min read·Mar 25, 2022--5--5
Jingyi Jessica LiinTowards Data ScienceA large-sample crisis or not?Sanity check by permutation should be done for large samples4 min read·Mar 16, 2022----