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Center for Computational Biology of Human Disease
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RShiny for prototyping + plotting two different user-input variables
RShiny for prototyping + plotting two different user-input variables
Last week after some team meetings I started using RShiny to prototype a webapp for a project I’m working on to show users how many…
August Guang
Apr 7, 2021
Power analyses for microbiome studies with micropower
Power analyses for microbiome studies with micropower
Power analyses are important for experimental study design so that the researcher has an idea of how many experiment subjects are needed…
August Guang
Jan 13, 2020
How to run Picard tools CollectHsMetrics on an exome sequencing library
How to run Picard tools CollectHsMetrics on an exome sequencing library
Picard tools are a set of tools for manipulating files (SAM, VCF, etc.) from high-throughput sequencing experiments. They include several…
Joselynn Wallace
Jan 8, 2020
Rhode Island Microbiome Symposium is January 16–17 at URI
Rhode Island Microbiome Symposium is January 16–17 at URI
Please join us at the Rhode Island Microbiome Symposium at Avedisian Hall (College of Pharmacy) at the University of Rhode Island on Jan…
August Guang
Aug 29, 2019
Building a consensus sequence with vcf files
Building a consensus sequence with vcf files
Building a consensus sequence from a VCF file is apparently asked a lot. Different use cases for it exist, one of which is to build…
August Guang
Aug 23, 2019
A Julia script to concatenate (FASTA format) multiple sequence alignments
A Julia script to concatenate (FASTA format) multiple sequence alignments
After going to JuliaCon2019 I’ve been inspired to use Julia more in my projects. I had previously tried it out before, but it was right…
August Guang
Aug 23, 2019
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