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rebelCoder

rebelCoder
in
Python in Plain English

Genome Toolkit. Part 3: building statistical data (k-mer frequency)

Biologists can use k-mer analysis to identify conserved sequences across different species. Let’s write such an algorithm.

Jan 2, 2023

Genome Toolkit. Part 3: building statistical data (k-mer frequency)

Jan 2, 2023

rebelCoder
in
Python in Plain English

Genome Toolkit. Part 2.1: Identifying, fixing, and testing a bug

Identifying, fixing, and testing a bug

Dec 11, 2022

Genome Toolkit. Part 2.1: Identifying, fixing, and testing a bug

Dec 11, 2022

rebelCoder
in
Python in Plain English

Tips & Tricks: A faster search for patterns (loop, list, regexp)

In this article, we are going to take a look at one of the algorithms we wrote in Genome Toolkit series, Part 2, and attempt to optimize…

Nov 30, 2022

Tips & Tricks: A faster search for patterns (loop, list, regexp)

Nov 30, 2022

rebelCoder
in
Python in Plain English

Genome Toolkit Part 1: Project Setup

Welcome to the new series, called “Genome Toolkit”. In this series, we will write a set of tools, that will help us find and build…

Oct 2, 2022

Genome Toolkit Part 1: Project Setup

Oct 2, 2022

rebelCoder
in
Python in Plain English

Genome Toolkit Part 2: In Dearch of Patterns

First function — counting patterns

Oct 2, 2022

Genome Toolkit Part 2: In Dearch of Patterns

Oct 2, 2022

rebelCoder

Getting started in Bioinformatics: A step-by-step guide.

A guide and advice on how to get started, or how to transition into Bioinformatics for people with biology or programming backgrounds.

Aug 31, 2020

Getting started in Bioinformatics: A step-by-step guide.

Aug 31, 2020

rebelCoder
in
Python in Plain English

Bioinformatics in Python: Tips & Tricks: (Hamming Distance)

Let’s take a look at how we can program Hamming Distance algorithm in three different ways

Aug 16, 2020

Bioinformatics in Python: Tips & Tricks: (Hamming Distance)

Aug 16, 2020

rebelCoder
in
Python in Plain English

Bioinformatics Tools Programming in Python with Qt: Part 2.

DNA Engine project structure and class setup.

Jun 24, 2020

Bioinformatics Tools Programming in Python with Qt: Part 2.

Jun 24, 2020

rebelCoder
in
Python in Plain English

From Python to Rust: Part 3.

Python dictionary, Rust HashMap and a DNA Reverse Complement function.

Jun 23, 2020

From Python to Rust: Part 3.

Jun 23, 2020

rebelCoder
in
Python in Plain English

From Python to Rust: Part 2

Strings, Functions, and Crates/Modules

Jun 4, 2020

From Python to Rust: Part 2

Jun 4, 2020

rebelCoder

rebelCoder

Programmer. Biotech. For life extension. Brain & Consciousness studies. Physics/Rocket/Satellite/Robotics/A.I. engineering for Space travel. Vegan. FOSS.

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