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Linux
#!/ngs/sh
Bioinformatics and the command line
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Linux
Andrea Telatin
in
#!/ngs/sh
Jun 12, 2020
Manage shared software with environment “modules”
How to setup “module load” in your shared Linux…
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6
Andrea Telatin
in
#!/ngs/sh
Sep 27, 2018
Is a Bash variable set?
Preventing unbound variables is good, but we need a way to tell if a variable has no content or has never been initialized
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1
Andrea Telatin
in
#!/ngs/sh
Oct 2, 2018
Pigz: a faster alternative to gzip for big files
Using multiple threads to compress files but maintaining compatibility with gunzip
The
gzip
program is incredibly popular among Linux applications, in spite of some…
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8
1 response
Andrea Telatin
in
#!/ngs/sh
Mar 6, 2018
Bash scripting safety net (Part 4)
Best practice to avoid common errors in Bash scripts, preventing execution if errors occur: “set -euo pipefail”
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1