Using Limma to find differentially expressed genes

Ritchie, ME, Phipson, B, Wu, D, Hu, Y, Law, CW, Shi, W, and Smyth, GK…

Following up library dependency in R package compilation

Hello there.

Subsampling a fastq file with awk

What you are going to find here

1. A minimal introduction of the awk command…

Reverse and find complement sequence in R

Recently, I am continuously being amazed by how a seemingly simple task is actually…

Run Seurat (an R Package) in a notebook interface on a server without root

tl;dr: Dependencies hurts…

Single or double?: AND operator and OR operator in R

Installing R package XML on MacOS 10.13.6

I updated my R packages the other day, and not surprisingly, one package failed to…

Downloading multiple samples from a entry at GEO Dataset

Piping a file list for another shell command

Being a student again takes a longer while than I expected to get used to, which…

Remote connection to Jupyter Notebook

Recently, I analyzed a few single cell RNA-seq datasets and experimented with several new…